PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00619.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 333aa    MW: 37440.9 Da    PI: 8.4397
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00619.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.83.4e-1941123286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       W+++e+laLi+a++e++ +l++g+lk  +Wee s  + ++ gf   +r+++qC++k+e+l+kry+ + +  +       +++pyf+ ++
  Migut.N00619.1.p  41 WSHDETLALIQAYQEKWYSLKKGQLKSFQWEELSVTVaARCGFdepTRTSTQCRHKIEKLRKRYRSELQKPNP------NSWPYFELMD 123
                       ********************************999986566776668******************99888776......35*****998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.3E-2040125No hitNo description
PROSITE profilePS500906.49340101IPR017877Myb-like domain
SMARTSM005955.8E-648130IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MASPPSSPPP PQSYPLSPNP ESIPTSSKST STPKKSAAFP WSHDETLALI QAYQEKWYSL  60
KKGQLKSFQW EELSVTVAAR CGFDEPTRTS TQCRHKIEKL RKRYRSELQK PNPNSWPYFE  120
LMDHMRRGPM PLSACPISAF KSNSYNNSNN VNHSYGGSYS GSVDYCFNNN NNQSDVGGSD  180
DSDEEWNAAA AKKNKSKSIN NIVHRDGKRV AVEQDFNGEG SRVVRGLRNV TNGKRKQYCD  240
DVDDDVDEEL QVEEQVEEGD GGMKLAEGIR GVAEKFMEME NRKIEMMRKT GIHWMEMEKK  300
RIAMILEGQK KILNLIGSAF GANKKSKMAH ES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833535.10.0PREDICTED: trihelix transcription factor ASIL1-like
TrEMBLA0A022RGV43e-97A0A022RGV4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124661516
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.12e-28Trihelix family protein